Settings

CDAPS allows user configuration via two methods.

The first method

User configurable options can be changed via a dialog built into CDAPS. This can be found by clicking on the Cytoscape menu as follows:

Apps -> Community Detection -> Settings

_images/settingsmenu.png

Doing the above will display a dialog as seen here:

_images/settingsdialog.png

Currently the only setting that can be changed is to set an alternate CDAPS REST Server which is the server that runs the community detection and functional enrichment (term mapping) algorithms.

Note

To reset back to the default server just remove all text from this field and click Update

The second method

Warning

This is for advanced users only and may cause CDAPS to fail and/or to use excessive CPU and network bandwidth

Edit -> Preferences -> Properties

In the dialog that appears, CDAPS configuration can be found by selecting CyCommunityDetection from dropdown menu.