Columns

This page describes the columns created by CDAPS in the network and node tables.

Network Columns

  • Columns created in network table when invoking Run Community Detection
_images/networkcolumns.png

  • name - String in format:

    Example:

  • __CD_OriginalNetwork - SUID of parent network. This value can change upon session save/reload. If CDAPS is unable to find the parent network a dialog will be displayed to the user letting them select the correct parent network.

    Note

    Setting the value of __CD_OriginalNetwork network attribute to a negative value will display the Parent network dialog chooser the next time View Interactions is invoked

  • description - Contains string in this format:

    Example:

  • prov:wasDerivedFrom - Name of parent network

  • prov:wasGeneratedBy - Denotes version of CDAPS and algorithm used in this format:

    Example:

Node Columns

In the node table columns created by CDAPS are prefixed with CD_

  • Columns created in node table when invoking Run Community Detection
_images/cdetectnodecolumns.png
  • CD_MemberList - String of space delimited node names representing members of this cluster
  • CD_MemberList_Size - Size of CD_MemberList
  • CD_MemberList_LogSize - Log of CD_MemberList_Size
  • CD_CommunityName - Name of community set by invocation of Run Functional Enrichment
  • CD_AnnotatedMembers - String of space delimited node names used to set value in CD_CommunityName
  • CD_AnnotatedMembers_Size - Size of CD_AnnotatedMembers
  • CD_AnnotatedMembers_Overlap - CD_AnnotatedMembers_Size divided by CD_MemberList_Size
  • CD_AnnotatedMembers_Pvalue - Pvalue obtained from term mapping algorithm invoked by Run Functional Enrichment
  • CD_Labeled - Boolean denoting if CD_CommunityName was set to a value other then blank or (none)
  • Columns created in node table when invoking Run Functional Enrichment
_images/enrichnodecolumns.png

  • CD_AnnotatedAlgorithm - Algorithm used to set value in CD_CommunityName in format:

    Example:

  • CD_NonAnnotatedMembers - String of space delimited node names NOT used by algorithm to set mapped term in CD_CommunityName

  • CD_AnnotatedMembers_SourceDB Source database used by algorithm to set mapped term in CD_CommunityName

  • CD_AnnotatedMembers_SourceTerm Id of mapped term set in CD_CommunityName

  • Columns created in node table when invoking Tally Attributes on Hierarchy
_images/resultingtallycols.png
  • CommunityDetectionTally::<TALLY SELECTED COLUMNS> - Each column selected in the tally will have an entry and the value is the count of members that did have a positive or true value in the column on the parent network
  • CommunityDetectionTally::Unmatched - Count of members in hierarchy cluster node that did NOT have a positive or true value in any of the tally columns

Note

CommunityDetectionTally is the namespace prefixed onto columns created when invoking Tally Attributes on Hierarchy

For more information click: Tally Attributes on Hierarchy